Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913058.1_cds_XP_016463142.1_56290
CDS Infomation

[gene=LOC107786205] [db_xref=GeneID:107786205] [protein=pleiotropic drug resistance protein 1 isoform X2] [protein_id=XP_016463142.1] [location=complement(join(286..426,526..918,1015..1068,1364..1440,1536..1695,2977..3150,3275..3395,8846..9183))] [gbkey=CDS]
Sequence

ATGGAGCCAACAAATTCAAGTAATTTTCGACCTAGTAGTATGAGGGGAAGTTTAAGGTTG
AAAAACAATTCTAAATGGAGAAATAATTGTACTGTTTTTAATCGTTCAACAAGAGATGAA
GATGATGAAGAAGCTCTTAAATGGGCAGCACTTGAAAAACTCCCAACATTTGATCGTTTA
AGAAAAGGTCTCTTGTTTGGATTACAAGGTGCATCTGCTGAAGTTGATATAAATAATCTT
GTATTTCAAGAAAGAAAGAATTTACTTGAAAGGCTTGTGGAAGTTGCAGATGAAGATAAT
GACAAGTTTTTGTTGAAACTCAAGGAAAGAACTGACAGAGTTGGGATTGATTTGCCATCA
ACAGAAGTAAGATATGAGCATCTAAATATTGTAGCAGATGCATATGTAGGAAGTAGAGCT
TTGCCTACATTTACCAACTTCATCACTGATTTTATTGAGGCAATGTGGAACTCTCTTCAT
ATTCTACCAAATCGAAAGAGGCAACTCACTATTCTAAATGATGTGAGTGGTATCATTAAG
CCTTGTAGATTGACTTTGCTTTTAGGACCTCCAGGTTCTGGTAAAACTACACTTTTATTA
GCTTTGGCCGGAAAGCTTGACCCTTCCCTTAAGGTTACTGGGAAAGTAACCTACAATGGA
CATGAAATGAATGAATTTGTGCCACAAAGAACTGCTGCTTATATTAGTCAGTTTGATTTG
CACATTGGAGAAATGACTGTGAGAGAAACCTTAGAATTCTCTGCCAGATGCCAGGGAGTT
GGCTCTCGTTATGAGATGTTGGATGAACTGGCAAGAAGAGAGAAAGCAGCTAATATCAAC
CCAGATCCTGATATTGATATCTTCATGAAGGTAGCAGCAACAGAGGGACAAGAAGCCAAT
TTTGTTACAGATTATGTTCTTAAGCTATTGGGGCTGGACATTTGTGCAGATAGTATGGTA
GGAGATGAAATGATAAGGGGTATCTCAGGAGGACAAAAGAAGTGTGTGACGACAGGTGAA
ATGTTTGTTGGACCGTCAAAGGCACTTTTCATGGATGAAATCTCAACTGGATTGGATAGT
TCCACGACTTATTCCATTGTGAATTCTCTAAGACATTCTGTGCAAATCTTGAATGGAACT
ACTTTGGTATCTCTCCTGCAGCCAGCACCCGAGACCTACGACTTGTTTGATGATATTATT
CTGTTATCAGATGGGCAAATTGTCTATCAGGGTCCTCGTGAAGACGTCCTTGGCTTCTTT
GAGTCCATGGGTTTCAAATGCCCTGATAGAAAAGGCGTGGCCGACTTCTTGCAAGAAAAG
GATCAACAACAATATTGGGTGAGGACGGATGAGCCTTACAGGTTTATCACTTCAAAAGAA
TTTGCTGAGCCATCCTGCTGCTTTGGCAACTCAAAAGTACGGTATAGGGAAGAAACAACT
CTTAAAGGTCTGCACTGA

Peptide Sequence

PEP ID

XP_016463142.1
PEP Infomation

PREDICTED: pleiotropic drug resistance protein 1 isoform X2 [Nicotiana tabacum]
Sequence

MEPTNSSNFRPSSMRGSLRLKNNSKWRNNCTVFNRSTRDEDDEEALKWAALEKLPTFDRL
RKGLLFGLQGASAEVDINNLVFQERKNLLERLVEVADEDNDKFLLKLKERTDRVGIDLPS
TEVRYEHLNIVADAYVGSRALPTFTNFITDFIEAMWNSLHILPNRKRQLTILNDVSGIIK
PCRLTLLLGPPGSGKTTLLLALAGKLDPSLKVTGKVTYNGHEMNEFVPQRTAAYISQFDL
HIGEMTVRETLEFSARCQGVGSRYEMLDELARREKAANINPDPDIDIFMKVAATEGQEAN
FVTDYVLKLLGLDICADSMVGDEMIRGISGGQKKCVTTGEMFVGPSKALFMDEISTGLDS
STTYSIVNSLRHSVQILNGTTLVSLLQPAPETYDLFDDIILLSDGQIVYQGPREDVLGFF
ESMGFKCPDRKGVADFLQEKDQQQYWVRTDEPYRFITSKEFAEPSCCFGNSKVRYREETT
LKGLH

Transcript Sequence

Gene sequence data has not been registered.